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SMAC_03670 protein (Sordaria macrospora) - STRING interaction network
"SMAC_03670" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_03670Hypothetical protein (470 aa)    
Predicted Functional Partners:
SMAC_06049
Hypothetical protein (824 aa)
 
            0.572
SMAC_01012
Hypothetical protein (680 aa)
     
 
  0.560
SMAC_04398
Hypothetical protein (504 aa)
     
 
  0.543
SMAC_07121
Hypothetical protein (328 aa)
     
   
  0.521
TRM8
Hypothetical protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (293 aa)
     
 
  0.519
SMAC_01688
Hypothetical protein (862 aa)
     
   
  0.475
TRM5
Hypothetical protein; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5’ of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding (423 aa)
     
   
  0.451
SMAC_05302
Hypothetical protein (1110 aa)
     
   
  0.445
SMAC_08274
Hypothetical protein (323 aa)
     
      0.431
SMAC_02412
Hypothetical protein (441 aa)
     
   
  0.415
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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