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SMAC_03709 protein (Sordaria macrospora) - STRING interaction network
"SMAC_03709" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_03709Hypothetical protein (782 aa)    
Predicted Functional Partners:
SMAC_06625
Hypothetical protein (217 aa)
     
  0.914
SMAC_01930
Hypothetical protein (198 aa)
       
  0.877
SMAC_03975
Hypothetical protein (789 aa)
     
  0.823
SMAC_03013
Hypothetical protein (898 aa)
     
  0.753
SMAC_01924
Hypothetical protein (490 aa)
     
  0.708
SMAC_05435
Hypothetical protein; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (916 aa)
     
  0.696
SMAC_00184
RAD50 protein (1317 aa)
     
 
  0.693
SMAC_08698
Hypothetical protein (2211 aa)
     
  0.640
SMAC_08696
Hypothetical protein (2223 aa)
     
  0.640
SMAC_00109
Hypothetical protein (824 aa)
       
  0.630
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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