STRINGSTRING
SMAC_00001 protein (Sordaria macrospora) - STRING interaction network
"SMAC_00001" - Hypothetical protein in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_00001Hypothetical protein (396 aa)    
Predicted Functional Partners:
SMAC_02917
Hypothetical protein (525 aa)
   
          0.502
SMAC_02965
Hypothetical protein (567 aa)
   
          0.496
SMAC_08365
Hypothetical protein (316 aa)
   
          0.495
SMAC_01475
Hypothetical protein (518 aa)
   
          0.492
SMAC_07252
SKI8 protein (357 aa)
   
          0.490
SMAC_04264
Hypothetical protein (342 aa)
   
          0.484
SMAC_08828
Hypothetical protein (721 aa)
   
          0.482
LIS1-2
Nuclear distribution protein pac-1b; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein- mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for nuclear migration during vegetative growth as well as development. Required for retrograde early endosome (EE) transport from the hyphal tip. Required for localization of dynein to the mitotic spindle poles. Recruits additional proteins to the dynein complex at SPBs (486 aa)
   
          0.465
SMAC_07639
Hypothetical protein (316 aa)
   
          0.461
SMAC_01566
Hypothetical protein (447 aa)
   
          0.457
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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