STRINGSTRING
CLU1 protein (Sordaria macrospora) - STRING interaction network
"CLU1" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLU1Hypothetical protein; mRNA-binding protein involved in proper cytoplasmic distribution of mitochondria (1199 aa)    
Predicted Functional Partners:
SMAC_08888
Hypothetical protein; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits (4983 aa)
     
      0.784
SMAC_08679
Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1274 aa)
     
      0.777
TIF35
Hypothetical protein (297 aa)
       
  0.754
SMAC_00563
Hypothetical protein (611 aa)
       
      0.749
SMAC_01977
Hypothetical protein (524 aa)
     
 
  0.707
SMAC_12010
Hypothetical protein (69 aa)
     
      0.660
NIP1
Hypothetical protein; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (862 aa)
     
 
  0.653
SMAC_06157
Hypothetical protein (645 aa)
     
      0.651
TIF34
Hypothetical protein; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (347 aa)
         
  0.629
SMAC_02528
Hypothetical protein (859 aa)
       
      0.619
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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