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SMAC_00168 protein (Sordaria macrospora) - STRING interaction network
"SMAC_00168" - TOP3 protein in Sordaria macrospora
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_00168TOP3 protein; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (603 aa)    
Predicted Functional Partners:
SMAC_04895
SGS1 protein (2276 aa)
   
  0.976
SMAC_08611
Hypothetical protein (274 aa)
     
  0.965
SMAC_07845
RAD52 protein (631 aa)
     
  0.884
SMAC_04096
Hypothetical protein (463 aa)
   
  0.871
SMAC_04277
RAD51 protein (353 aa)
     
  0.847
SMAC_06758
Hypothetical protein (1075 aa)
   
  0.831
SMAC_03537
RAD54 protein (824 aa)
     
 
  0.799
SMAC_01310
Hypothetical protein (2293 aa)
     
  0.797
SMAC_11630
Hypothetical protein (89 aa)
     
  0.793
SMAC_10163
Hypothetical protein (209 aa)
     
  0.793
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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