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SMAC_00184 protein (Sordaria macrospora) - STRING interaction network
"SMAC_00184" - RAD50 protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_00184RAD50 protein (1317 aa)    
Predicted Functional Partners:
SMAC_00050
MRE11 protein (718 aa)
   
  0.990
SMAC_01310
Hypothetical protein (2293 aa)
     
  0.944
scc1
MCD1/ SCC1/Rad21 protein (658 aa)
     
 
  0.917
SMAC_00927
Hypothetical protein (646 aa)
     
  0.914
SMAC_00164
Hypothetical protein; Single-stranded DNA-dependent ATP-dependent helicase (724 aa)
     
  0.908
SMAC_06425
EXO1 protein (722 aa)
     
  0.904
SMAC_04277
RAD51 protein (353 aa)
   
  0.903
SMAC_01999
SMC3 protein (1199 aa)
   
  0.901
SMAC_03113
RFA1 protein (610 aa)
     
  0.900
SMAC_03194
SPO11 protein (384 aa)
     
  0.896
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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