STRINGSTRING
SMAC_00217 protein (Sordaria macrospora) - STRING interaction network
"SMAC_00217" - RAD1 protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_00217RAD1 protein (462 aa)    
Predicted Functional Partners:
SMAC_02665
Hypothetical protein (373 aa)
     
  0.983
SMAC_01904
Hypothetical protein (406 aa)
     
  0.975
SMAC_00450
RAD17 protein (948 aa)
     
  0.969
SMAC_04881
Hypothetical protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
     
 
  0.948
SMAC_01310
Hypothetical protein (2293 aa)
       
  0.878
SMAC_03405
Hypothetical protein (257 aa)
       
      0.867
SMAC_00490
Hypothetical protein (732 aa)
       
      0.867
SMAC_00392
Hypothetical protein; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (204 aa)
       
      0.867
SMAC_01921
40S ribosomal protein S3 (262 aa)
       
      0.867
SMAC_05662
Hypothetical protein (296 aa)
       
      0.867
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
Server load: low (9%) [HD]