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SMAC_00243 protein (Sordaria macrospora) - STRING interaction network
"SMAC_00243" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_00243Hypothetical protein (193 aa)    
Predicted Functional Partners:
SMAC_03803
Hypothetical protein (152 aa)
     
  0.982
SMAC_08854
Hypothetical protein (157 aa)
     
  0.981
SMAC_02456
Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1117 aa)
     
  0.981
SMAC_01403
Hypothetical protein (411 aa)
     
  0.981
SMAC_00129
Hypothetical protein (160 aa)
     
  0.981
SMAC_01684
Hypothetical protein (234 aa)
     
  0.979
SMAC_02468
Hypothetical protein (157 aa)
     
  0.978
SMAC_07798
Hypothetical protein (625 aa)
     
  0.977
SMAC_01269
Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (112 aa)
     
  0.976
SMAC_07456
Hypothetical protein; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1069 aa)
       
  0.976
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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