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SMAC_00258 protein (Sordaria macrospora) - STRING interaction network
"SMAC_00258" - Ribosome biogenesis protein NSA2 in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_00258Ribosome biogenesis protein NSA2 (259 aa)    
Predicted Functional Partners:
SMAC_10240
Hypothetical protein (180 aa)
     
  0.999
SMAC_07166
Ribosome biogenesis protein RLP24 (228 aa)
     
  0.994
SMAC_01700
Hypothetical protein; Involved in the biogenesis of the 60S ribosomal subunit (660 aa)
     
 
  0.994
RPS1
40S ribosomal protein S1 (256 aa)
     
  0.993
SMAC_01921
40S ribosomal protein S3 (262 aa)
     
  0.993
SMAC_05267
40S ribosomal protein S4 (261 aa)
     
  0.993
SMAC_06262
40S ribosomal protein S6 (239 aa)
     
  0.993
SMAC_02834
40S ribosomal protein S11 (161 aa)
     
  0.992
SMAC_08177
40S ribosomal protein S25 (97 aa)
     
  0.992
SMAC_06245
Hypothetical protein (433 aa)
     
 
  0.991
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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