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SMAC_00327 protein (Sordaria macrospora) - STRING interaction network
"SMAC_00327" - RIM15 protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_00327RIM15 protein (1947 aa)    
Predicted Functional Partners:
SMAC_02513
Histidine kinase group protein (2114 aa)
   
 
  0.963
SMAC_01638
CR1 protein (2312 aa)
     
  0.953
SMAC_02346
Hypothetical protein (219 aa)
     
  0.931
SMAC_05185
Hypothetical protein (303 aa)
     
  0.931
SMAC_04592
Hypothetical protein (275 aa)
     
  0.931
SMAC_07080
Hypothetical protein (534 aa)
     
0.910
SMAC_06263
Hypothetical protein (3992 aa)
     
  0.852
SMAC_06117
Hypothetical protein (726 aa)
     
  0.843
SMAC_00538
Hypothetical protein (612 aa)
     
  0.826
SMAC_05827
Hypothetical protein (927 aa)
     
0.772
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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