STRINGSTRING
SMAC_00377 protein (Sordaria macrospora) - STRING interaction network
"SMAC_00377" - Hypothetical protein in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_00377Hypothetical protein (500 aa)    
Predicted Functional Partners:
SMAC_05405
Hypothetical protein (641 aa)
     
  0.909
SMAC_02366
Hypothetical protein; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis (1563 aa)
         
  0.594
NTH1
Base-excision repair protein; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines (805 aa)
   
 
  0.578
SMAC_05396
Hypothetical protein (1947 aa)
     
 
  0.566
SMAC_03598
Hypothetical protein (484 aa)
     
 
  0.550
SMAC_05541
Hypothetical protein (415 aa)
       
 
  0.539
SMAC_08795
Hypothetical protein (438 aa)
     
 
  0.525
UNG1
Uracil DNA N-glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (434 aa)
   
 
  0.498
SMAC_07845
RAD52 protein (631 aa)
       
 
  0.490
SMAC_00422
Hypothetical protein (424 aa)
       
 
  0.484
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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