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SMAC_00422 protein (Sordaria macrospora) - STRING interaction network
"SMAC_00422" - Hypothetical protein in Sordaria macrospora
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_00422Hypothetical protein (424 aa)    
Predicted Functional Partners:
SMAC_05405
Hypothetical protein (641 aa)
   
  0.812
SMAC_10519
Hypothetical protein (223 aa)
     
  0.637
SMAC_08039
MSH3 protein; Component of the post-replicative DNA mismatch repair system (MMR) (1157 aa)
 
 
 
  0.554
FEN1
Hypothetical protein; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (394 aa)
   
 
  0.549
NTH1
Base-excision repair protein; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3’ to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines (805 aa)
     
 
  0.541
SMAC_04881
Hypothetical protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
       
 
  0.530
SMAC_02455
RAD57 protein (481 aa)
       
 
  0.527
SMAC_05386
Hypothetical protein (672 aa)
       
 
  0.515
SMAC_03612
MSH6 protein; Component of the post-replicative DNA mismatch repair system (MMR) (1230 aa)
     
 
  0.512
SMAC_03669
MSH2 protein; Component of the post-replicative DNA mismatch repair system (MMR) (934 aa)
   
 
  0.512
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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