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SMAC_00429 protein (Sordaria macrospora) - STRING interaction network
"SMAC_00429" - Hypothetical protein in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_00429Hypothetical protein (345 aa)    
Predicted Functional Partners:
SMAC_01781
Hypothetical protein (696 aa)
     
  0.992
SMAC_06213
Hypothetical protein (311 aa)
       
  0.991
SMAC_01684
Hypothetical protein (234 aa)
     
  0.979
SMAC_00825
Hypothetical protein (348 aa)
     
  0.979
SMAC_07456
Hypothetical protein; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1069 aa)
     
  0.979
SMAC_04012
Hypothetical protein (352 aa)
     
  0.978
SMAC_05005
Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1761 aa)
       
  0.978
SMAC_06332
Hypothetical protein; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase (303 aa)
     
  0.975
SMAC_01880
Hypothetical protein (285 aa)
       
  0.973
SMAC_02205
Hypothetical protein (867 aa)
     
  0.973
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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