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SMAC_00477 protein (Sordaria macrospora) - STRING interaction network
"SMAC_00477" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_00477Hypothetical protein (437 aa)    
Predicted Functional Partners:
SMAC_08311
Hypothetical protein (714 aa)
     
  0.979
SMAC_03707
Hypothetical protein (826 aa)
     
  0.979
SMAC_04568
Hypothetical protein (899 aa)
     
  0.977
SMAC_07579
Hypothetical protein (465 aa)
       
  0.819
SMAC_01715
Hypothetical protein (669 aa)
     
  0.735
SMAC_05435
Hypothetical protein; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (916 aa)
     
  0.733
SMAC_05365
Hypothetical protein (589 aa)
     
  0.723
SMAC_07167
Hypothetical protein (232 aa)
       
  0.717
SMAC_00408
Hypothetical protein (863 aa)
     
  0.712
SMAC_04363
Hypothetical protein; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (227 aa)
       
  0.709
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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