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SMAC_00615 protein (Sordaria macrospora) - STRING interaction network
"SMAC_00615" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_00615Hypothetical protein (595 aa)    
Predicted Functional Partners:
SMAC_03231
Hypothetical protein (1032 aa)
     
  0.899
SMAC_02295
Hypothetical protein (565 aa)
       
  0.822
SMAC_03405
Hypothetical protein (257 aa)
       
  0.703
SMAC_02791
Hypothetical protein (1667 aa)
     
  0.659
SMAC_07456
Hypothetical protein; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre- mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene (1069 aa)
       
  0.655
SMAC_05320
Hypothetical protein (436 aa)
       
  0.648
SMAC_06758
Hypothetical protein (1075 aa)
     
      0.636
SMAC_01503
Hypothetical protein (655 aa)
     
  0.635
SMAC_04812
Hypothetical protein (2023 aa)
     
  0.635
SMAC_01041
Hypothetical protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1407 aa)
         
  0.634
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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