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SMAC_02563 protein (Sordaria macrospora) - STRING interaction network
"SMAC_02563" - rRNA methyltransferase NOP1 in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_02563rRNA methyltransferase NOP1 (329 aa)    
Predicted Functional Partners:
SMAC_08272
Hypothetical protein (594 aa)
   
  0.998
SMAC_07471
Hypothetical protein (516 aa)
 
  0.995
SMAC_05528
Ribosome biogenesis protein Nhp2 (249 aa)
     
  0.992
SMAC_03984
Hypothetical protein (478 aa)
   
 
  0.991
SMAC_04021
Small nucleolar ribonucleoprotein SNU13 (128 aa)
     
  0.990
SMAC_06245
Hypothetical protein (433 aa)
     
 
  0.986
SMAC_02640
Hypothetical protein (897 aa)
     
  0.985
SMAC_08609
Hypothetical protein (1105 aa)
     
  0.984
SMAC_04301
Hypothetical protein (621 aa)
   
  0.983
SMAC_07377
Hypothetical protein (1052 aa)
     
  0.983
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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