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SMAC_02615 protein (Sordaria macrospora) - STRING interaction network
"SMAC_02615" - Hypothetical protein in Sordaria macrospora
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_02615Hypothetical protein (645 aa)    
Predicted Functional Partners:
SMAC_04895
SGS1 protein (2276 aa)
     
  0.728
SMAC_00927
Hypothetical protein (646 aa)
     
  0.708
SMAC_11943
Hypothetical protein (79 aa)
       
 
  0.701
SMAC_04881
Hypothetical protein; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (259 aa)
     
  0.686
SMAC_00050
MRE11 protein (718 aa)
       
  0.662
SMAC_00184
RAD50 protein (1317 aa)
         
  0.637
SMAC_06758
Hypothetical protein (1075 aa)
     
 
    0.632
SMAC_06685
Hypothetical protein (2835 aa)
       
  0.604
FEN1
Hypothetical protein; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. It enters the flap from the 5’-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site-terminated flap. Acts as a [...] (394 aa)
     
  0.592
SMAC_06425
EXO1 protein (722 aa)
     
  0.585
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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