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UTP25 protein (Sordaria macrospora) - STRING interaction network
"UTP25" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UTP25Hypothetical protein; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2 (742 aa)    
Predicted Functional Partners:
SMAC_07377
Hypothetical protein (1052 aa)
     
  0.959
SMAC_02640
Hypothetical protein (897 aa)
     
 
  0.958
SMAC_04054
rRNA processing protein RRP9 (629 aa)
     
  0.957
SMAC_08549
Hypothetical protein (411 aa)
     
 
  0.957
SMAC_00433
Hypothetical protein (988 aa)
     
 
  0.956
SMAC_03096
Hypothetical protein (921 aa)
     
 
  0.955
SMAC_01801
Hypothetical protein (1130 aa)
     
 
  0.955
SMAC_00342
Hypothetical protein (914 aa)
     
 
    0.954
SMAC_06224
Hypothetical protein (544 aa)
     
 
    0.954
SMAC_08131
Hypothetical protein (481 aa)
     
 
    0.954
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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