STRINGSTRING
SMAC_01239 protein (Sordaria macrospora) - STRING interaction network
"SMAC_01239" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_01239Hypothetical protein (278 aa)    
Predicted Functional Partners:
SMAC_01867
Hypothetical protein (799 aa)
     
  0.781
SMAC_08493
Hypothetical protein (233 aa)
     
  0.781
SMAC_01662
Hypothetical protein (477 aa)
         
  0.662
SMAC_02370
Hypothetical protein (955 aa)
       
  0.637
SMAC_06532
Hypothetical protein; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1428 aa)
       
  0.637
SMAC_06365
Hypothetical protein (584 aa)
       
  0.630
SMAC_02344
Hypothetical protein (155 aa)
       
  0.553
SMAC_02796
Hypothetical protein (984 aa)
     
  0.543
SMAC_08489
Hypothetical protein (1117 aa)
     
  0.543
SMAC_07544
Hypothetical protein (1350 aa)
     
  0.543
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
Server load: low (12%) [HD]