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SMAC_01244 protein (Sordaria macrospora) - STRING interaction network
"SMAC_01244" - Phytoene dehydrogenase AL-1 in Sordaria macrospora
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_01244Phytoene dehydrogenase AL-1 (597 aa)    
Predicted Functional Partners:
SMAC_01277
Geranylgeranyl-diphosphate geranylgeranyltransferase; Bifunctional enzyme that catalyzes the reactions from geranylgeranyl diphosphate to phytoene (phytoene synthase) and lycopene to beta-carotene via the intermediate gamma-carotene (lycopene cyclase) (602 aa)
   
 
  0.967
SMAC_07413
Hypothetical protein (484 aa)
   
 
  0.748
SMAC_07863
Hypothetical protein (383 aa)
   
 
  0.692
SMAC_00303
Hypothetical protein (361 aa)
   
   
  0.596
SMAC_06570
Farnesyltranstransferase (436 aa)
         
  0.523
SMAC_11699
Hypothetical protein (99 aa)
 
     
  0.495
SMAC_08723
Hypothetical protein (444 aa)
         
  0.478
SMAC_03244
Hypothetical protein (347 aa)
         
  0.477
SMAC_04952
Hypothetical protein (476 aa)
       
  0.474
SMAC_01396
Hypothetical protein (334 aa)
       
  0.474
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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