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SMAC_01287 protein (Sordaria macrospora) - STRING interaction network
"SMAC_01287" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_01287Hypothetical protein (349 aa)    
Predicted Functional Partners:
SMAC_05528
Ribosome biogenesis protein Nhp2 (249 aa)
     
      0.838
SMAC_03984
Hypothetical protein (478 aa)
   
      0.823
SMAC_04434
Hypothetical protein (425 aa)
   
      0.684
SMAC_03957
Hypothetical protein (447 aa)
     
        0.619
SMAC_03058
Hypothetical protein (119 aa)
     
      0.611
UTP25
Hypothetical protein; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2 (742 aa)
     
   
  0.562
SMAC_10240
Hypothetical protein (180 aa)
   
        0.527
SMAC_06758
Hypothetical protein (1075 aa)
 
 
        0.521
SMAC_00400
Hypothetical protein (595 aa)
     
        0.515
SMAC_02008
mRNA turnover protein MRT4 (255 aa)
     
        0.513
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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