STRINGSTRING
SMAC_01392 protein (Sordaria macrospora) - STRING interaction network
"SMAC_01392" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_01392Hypothetical protein (1156 aa)    
Predicted Functional Partners:
SMAC_06340
Hypothetical protein (454 aa)
   
 
  0.980
SMAC_03091
Hypothetical protein (529 aa)
       
  0.973
SMAC_04800
Hypothetical protein (256 aa)
   
   
  0.637
SMAC_00934
Hypothetical protein (524 aa)
   
   
  0.583
SMAC_03244
Hypothetical protein (347 aa)
   
 
  0.580
SMAC_05737
Hypothetical protein (531 aa)
     
   
  0.579
SMAC_06570
Farnesyltranstransferase (436 aa)
   
 
  0.552
SMAC_07927
Hypothetical protein (559 aa)
       
 
  0.549
SMAC_00952
Hypothetical protein (306 aa)
     
 
  0.548
SMAC_00310
Hypothetical protein (521 aa)
     
 
  0.525
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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