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SMAC_01416 protein (Sordaria macrospora) - STRING interaction network
"SMAC_01416" - Hypothetical protein in Sordaria macrospora
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_01416Hypothetical protein (972 aa)    
Predicted Functional Partners:
SMAC_01474
Hypothetical protein (911 aa)
   
   
  0.768
SMAC_07606
Hypothetical protein (1028 aa)
   
   
  0.768
SMAC_06043
Hypothetical protein (525 aa)
   
   
  0.624
CTU1
Hypothetical protein; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. Prior mcm(5) tRNA modification by the elongator complex is required for 2-thiolation. May also be involved in protein urmylation (403 aa)
              0.452
SMAC_02325
Hypothetical protein (789 aa)
              0.452
SMAC_00145
Hypothetical protein (223 aa)
              0.448
SMAC_03693
Hypothetical protein (519 aa)
     
 
    0.442
SMAC_00930
Hypothetical protein (1806 aa)
              0.431
SMAC_09364
Hypothetical protein (1062 aa)
   
   
  0.429
SMAC_04388
Hypothetical protein (874 aa)
   
   
  0.429
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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