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SMAC_01608 protein (Sordaria macrospora) - STRING interaction network
"SMAC_01608" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_01608Hypothetical protein (203 aa)    
Predicted Functional Partners:
SMAC_04031
Hypothetical protein (216 aa)
     
0.985
SMAC_06179
Hypothetical protein (219 aa)
     
  0.984
SMAC_02646
Hypothetical protein (209 aa)
     
0.952
SMAC_05435
Hypothetical protein; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (916 aa)
       
  0.776
SMAC_00646
Hypothetical protein (305 aa)
     
  0.760
SMAC_06625
Hypothetical protein (217 aa)
     
  0.752
SMAC_04008
Hypothetical protein (775 aa)
     
  0.740
SMAC_04596
Hypothetical protein (311 aa)
     
  0.726
SMAC_06761
Hypothetical protein (215 aa)
     
  0.720
SMAC_03493
Hypothetical protein (871 aa)
     
  0.712
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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