STRINGSTRING
SMAC_05000 protein (Sordaria macrospora) - STRING interaction network
"SMAC_05000" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_05000Hypothetical protein (153 aa)    
Predicted Functional Partners:
SMAC_08463
Hypothetical protein (264 aa)
   
 
  0.857
SMAC_04488
Hypothetical protein (162 aa)
   
 
  0.831
SMAC_06668
Hypothetical protein (138 aa)
     
 
  0.793
SMAC_06412
Hypothetical protein (135 aa)
     
 
  0.695
DRE2
Hypothetical protein; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Electrons are transferred to the Fe-S cluster from NADPH via the FAD- and FMN-containing protein TAH18. Has anti-apoptotic effects in the cell. Involved in negative control of H(2)O(2)-induced cell death (321 aa)
     
 
  0.525
SMAC_03769
Hypothetical protein (1357 aa)
         
  0.463
SMAC_08113
Hypothetical protein (250 aa)
     
 
  0.459
SMAC_01223
Hypothetical protein (105 aa)
     
   
  0.447
SMAC_04791
Hypothetical protein (542 aa)
       
 
  0.419
SMAC_09058
Hypothetical protein (132 aa)
     
   
  0.418
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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