STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_03278WGS project CABT00000000 data, contig 2.10; Belongs to the thiolase-like superfamily. Thiolase family. (419 aa)    
Predicted Functional Partners:
SMAC_06340
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 0.990
SMAC_08249
WGS project CABT00000000 data, contig 2.56; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.974
SMAC_04665
WGS project CABT00000000 data, contig 2.21.
  
 0.963
SMAC_00284
WGS project CABT00000000 data, contig 2.1.
  
 0.951
SMAC_04155
WGS project CABT00000000 data, contig 2.15.
  
 
 0.930
SMAC_04851
WGS project CABT00000000 data, contig 2.1.
   
 0.928
SMAC_05789
WGS project CABT00000000 data, contig 2.6; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
0.927
SMAC_04779
WGS project CABT00000000 data, contig 2.21; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
0.923
SMAC_07559
WGS project CABT00000000 data, contig 2.7.
   
 0.917
SMAC_03604
Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.
  
 
 0.904
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora k-hell, Sordaria macrospora k-hell
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.