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SMAC_03312 protein (Sordaria macrospora) - STRING interaction network
"SMAC_03312" - 40S ribosomal protein S28 in Sordaria macrospora
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_0331240S ribosomal protein S28 (68 aa)    
Predicted Functional Partners:
SMAC_06262
40S ribosomal protein S6 (239 aa)
   
  0.998
SMAC_02194
40S ribosomal protein S12 (148 aa)
   
  0.998
SMAC_04909
40S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability (87 aa)
     
  0.998
SMAC_06072
40S ribosomal protein S26 (120 aa)
     
  0.998
SMAC_02105
40S ribosomal protein S19 (150 aa)
     
  0.997
SMAC_02109
40S ribosomal protein S14 (150 aa)
     
  0.997
SMAC_08178
40S ribosomal protein S5 (213 aa)
     
  0.997
RPS1
40S ribosomal protein S1 (256 aa)
     
  0.997
SMAC_07374
40S ribosomal protein S17 (147 aa)
     
  0.997
SMAC_04917
40S ribosomal protein S16 (142 aa)
     
  0.997
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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