STRINGSTRING
SMAC_03404 protein (Sordaria macrospora) - STRING interaction network
"SMAC_03404" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_03404Hypothetical protein (644 aa)    
Predicted Functional Partners:
SMAC_04787
Hypothetical protein (321 aa)
 
 
  0.913
SMAC_11156
Hypothetical protein (153 aa)
 
 
  0.910
SMAC_01843
Hypothetical protein (349 aa)
 
 
  0.908
SMAC_10667
Hypothetical protein (126 aa)
 
 
  0.866
SMAC_02313
Hypothetical protein (434 aa)
   
 
  0.615
SMAC_01190
Hypothetical protein (350 aa)
   
 
  0.615
SMAC_08147
Hypothetical protein (161 aa)
   
 
  0.615
SMAC_06278
Hypothetical protein (358 aa)
         
  0.516
SMAC_02431
Hypothetical protein (2116 aa)
   
   
  0.508
SMAC_05027
Hypothetical protein (473 aa)
     
   
  0.492
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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