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SMAC_03426 protein (Sordaria macrospora) - STRING interaction network
"SMAC_03426" - Hypothetical protein in Sordaria macrospora
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAC_03426Hypothetical protein (531 aa)    
Predicted Functional Partners:
SMAC_08845
Hypothetical protein (434 aa)
     
  0.983
SMAC_03445
Hypothetical protein; Binds the poly(A) tail of mRNA (754 aa)
     
  0.972
SMAC_02671
Elongation factor 1 gamma domain-containing protein (403 aa)
     
  0.939
SMAC_09218
Hypothetical protein; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non-functional ribosomes and degrade damaged mRNAs (406 aa)
     
  0.907
SMAC_03427
Hypothetical protein (189 aa)
 
   
    0.906
SMAC_10240
Hypothetical protein (180 aa)
     
  0.904
RPS1
40S ribosomal protein S1 (256 aa)
     
  0.880
SMAC_08275
40S ribosomal protein S0 (264 aa)
   
  0.854
SMAC_06262
40S ribosomal protein S6 (239 aa)
     
  0.841
SMAC_00248
40S ribosomal protein S15 (152 aa)
     
  0.839
Your Current Organism:
Sordaria macrospora
NCBI taxonomy Id: 771870
Other names: S. macrospora, S. macrospora k-hell, Sordaria, Sordaria macrospora, Sordaria macrospora k hell, Sordaria macrospora k-hell
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