STRINGSTRING
tmod protein (Ciona intestinalis) - STRING interaction network
"tmod" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmodUncharacterized protein (366 aa)    
Predicted Functional Partners:
actn2
Uncharacterized protein (927 aa)
     
  0.627
ENSCING00000006235
Uncharacterized protein (164 aa)
     
 
  0.627
TTN
Uncharacterized protein (21338 aa)
     
 
    0.617
ENSCING00000005333
Uncharacterized protein (179 aa)
     
 
  0.612
ENSCING00000001417
Uncharacterized protein (165 aa)
     
 
    0.609
tni
Troponin I (225 aa)
     
 
    0.607
ENSCING00000004377
Uncharacterized protein (1132 aa)
     
 
    0.606
ctm1
Tropomyosin, smooth muscle/fibroblast CTM1 ; The function of tropomyosin in smooth muscle and non- muscle cells is not clear (284 aa)
     
  0.583
if-a
Intermediate filament protein IF-A (523 aa)
         
    0.580
ENSCING00000002130
Uncharacterized protein (994 aa)
     
    0.579
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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