STRINGSTRING
ENSCING00000000087 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000000087" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000000087Uncharacterized protein (624 aa)    
Predicted Functional Partners:
smad4
Smad4 protein (527 aa)
     
  0.748
smad2/3b
Smad2/3b protein (426 aa)
     
  0.742
smad2/3a
Smad2/3a protein (446 aa)
     
  0.732
smad1/5
Smad1/5 protein (344 aa)
     
  0.732
ENSCING00000020815
Uncharacterized protein (347 aa)
       
  0.635
ENSCING00000007605
Uncharacterized protein (381 aa)
       
  0.635
r27a
R27a protein (155 aa)
       
  0.567
Cin.25686
Uncharacterized protein (373 aa)
     
  0.562
smad6/7
Smad6/7 protein (361 aa)
     
  0.479
ENSCING00000022875
Uncharacterized protein (145 aa)
     
  0.479
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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