STRINGSTRING
tlk1 protein (Ciona intestinalis) - STRING interaction network
"tlk1" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlk1Uncharacterized protein (673 aa)    
Predicted Functional Partners:
ENSCING00000018211
Uncharacterized protein (169 aa)
     
 
  0.951
ENSCING00000000181
Uncharacterized protein (157 aa)
     
 
  0.951
Cin.28262
Uncharacterized protein (407 aa)
       
      0.871
xpo1
Uncharacterized protein (1071 aa)
     
      0.461
ENSCING00000000139
Uncharacterized protein (294 aa)
       
 
0.455
Cin.41209
Uncharacterized protein (256 aa)
     
      0.447
ENSCING00000012988
Uncharacterized protein (334 aa)
           
  0.410
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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