STRINGSTRING
zf(ubp)-4 protein (Ciona intestinalis) - STRING interaction network
"zf(ubp)-4" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zf(ubp)-4Uncharacterized protein (218 aa)    
Predicted Functional Partners:
ENSCING00000020031
Uncharacterized protein (118 aa)
     
  0.961
ENSCING00000019152
Uncharacterized protein (82 aa)
       
  0.961
ENSCING00000023749
Uncharacterized protein (90 aa)
       
  0.909
ENSCING00000022206
Uncharacterized protein (486 aa)
     
  0.895
ddx23
Uncharacterized protein (779 aa)
     
    0.869
ENSCING00000008817
Uncharacterized protein (956 aa)
     
  0.856
ENSCING00000001299
Uncharacterized protein (508 aa)
     
  0.855
ncbp1
Uncharacterized protein (795 aa)
     
    0.854
ENSCING00000024924
Uncharacterized protein (112 aa)
     
  0.845
snrnp200
Uncharacterized protein (2140 aa)
     
  0.845
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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