STRINGSTRING
Cin.37839 protein (Ciona intestinalis) - STRING interaction network
"Cin.37839" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.37839Uncharacterized protein (237 aa)    
Predicted Functional Partners:
ENSCING00000017248
Uncharacterized protein (221 aa)
     
      0.670
ENSCING00000009528
Uncharacterized protein (214 aa)
     
 
  0.564
ENSCING00000009020
Uncharacterized protein (496 aa)
       
      0.552
Cin.20706
Uncharacterized protein (108 aa)
     
   
  0.460
ENSCING00000023012
Zinc finger protein ZF(C2H2)-151 (615 aa)
           
  0.456
ENSCING00000004045
Uncharacterized protein (368 aa)
     
   
  0.444
ENSCING00000007055
Uncharacterized protein (512 aa)
     
   
  0.438
ENSCING00000000567
Uncharacterized protein (458 aa)
           
  0.437
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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