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tgfbr-iib protein (Ciona intestinalis) - STRING interaction network
"tgfbr-iib" - Transforming growth factor beta receptor precursor in Ciona intestinalis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tgfbr-iibTransforming growth factor beta receptor precursor (567 aa)    
Predicted Functional Partners:
tgfbeta2
Transforming growth factor beta superfamily signaling ligand precursor (435 aa)
       
  0.963
smad2/3b
Smad2/3b protein (426 aa)
     
  0.955
ENSCING00000007996
E3 ubiquitin-protein ligase (752 aa)
       
  0.923
tgfbr-ic
TGFbeta-recepter I homologue precursor (486 aa)
     
0.911
rhoa
RhoA protein (193 aa)
       
  0.900
tgfbr-ib
Transforming growth factor beta receptor (531 aa)
     
0.860
tgfbr-ia
Transforming growth factor beta receptor precursor (423 aa)
     
0.860
bmp2/4
Transforming growth factor beta superfamily signaling ligand precursor (376 aa)
       
  0.822
ENSCING00000013600
Transforming growth factor beta superfamily signaling ligand precursor (492 aa)
       
  0.822
ENSCING00000008562
Transforming growth factor beta superfamily signaling ligand precursor (385 aa)
       
  0.822
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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