STRINGSTRING
ciap protein (Ciona intestinalis) - STRING interaction network
"ciap" - Endoderm-specific alkaline phosphatase precursor in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ciapEndoderm-specific alkaline phosphatase precursor (579 aa)    
Predicted Functional Partners:
ENSCING00000018256
Uncharacterized protein (78 aa)
         
  0.903
ENSCING00000013511
Uncharacterized protein (140 aa)
         
    0.900
pold1
DNA polymerase (1064 aa)
           
  0.713
ENSCING00000001608
DNA polymerase (382 aa)
           
  0.713
ENSCING00000009655
DNA polymerase (2157 aa)
           
  0.712
ENSCING00000008954
Uncharacterized protein (642 aa)
     
 
  0.698
ENSCING00000024528
Uncharacterized protein (334 aa)
           
  0.694
ENSCING00000004204
Uncharacterized protein (166 aa)
       
 
  0.692
ENSCING00000008370
Uncharacterized protein (296 aa)
       
 
  0.691
ENSCING00000010522
Uncharacterized protein (145 aa)
       
      0.689
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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