STRINGSTRING
ENSCING00000000245 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000000245" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000000245Uncharacterized protein (404 aa)    
Predicted Functional Partners:
ci-htf-1
Transcription factor ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1297 aa)
   
   
  0.669
ENSCING00000015162
Uncharacterized protein (249 aa)
   
 
  0.634
impdh2
Inosine-5’-monophosphate dehydrogenase (384 aa)
   
        0.610
ENSCING00000003142
Uncharacterized protein (371 aa)
     
 
  0.600
ENSCING00000017979
Uncharacterized protein (475 aa)
       
  0.589
ENSCING00000002830
Uncharacterized protein (473 aa)
       
  0.589
ENSCING00000017984
Uncharacterized protein (377 aa)
           
  0.568
ENSCING00000008384
Uncharacterized protein (380 aa)
           
  0.568
ENSCING00000011364
Uncharacterized protein (396 aa)
     
 
  0.520
ENSCING00000006135
Uncharacterized protein (214 aa)
   
 
  0.507
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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