STRINGSTRING
rut protein (Ciona intestinalis) - STRING interaction network
"rut" - Adenylate cyclase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rutAdenylate cyclase; Uncharacterized protein (439 aa)    
Predicted Functional Partners:
ENSCING00000007423
Uncharacterized protein (630 aa)
     
  0.960
ENSCING00000021553
Uncharacterized protein (221 aa)
     
  0.958
pde10a
Uncharacterized protein (784 aa)
     
  0.958
ENSCING00000022281
Uncharacterized protein (179 aa)
     
  0.958
ENSCING00000006658
Uncharacterized protein (271 aa)
     
 
  0.938
pkm
Pyruvate kinase (534 aa)
       
  0.928
ENSCING00000007249
Uncharacterized protein (947 aa)
         
0.912
ENSCING00000004328
Uncharacterized protein LOC100177987 (257 aa)
       
  0.909
ENSCING00000013757
Uncharacterized protein LOC100176380 (388 aa)
       
  0.907
ENSCING00000005607
Nucleoside diphosphate kinase (163 aa)
       
  0.907
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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