STRINGSTRING
Cin.11699 protein (Ciona intestinalis) - STRING interaction network
"Cin.11699" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.11699Uncharacterized protein (172 aa)    
Predicted Functional Partners:
ENSCING00000019847
Zinc finger protein LOC723799 (1298 aa)
     
  0.986
ENSCING00000010516
Uncharacterized protein (228 aa)
     
  0.979
ENSCING00000012884
Uncharacterized protein (402 aa)
     
  0.977
ENSCING00000009117
Uncharacterized protein (1237 aa)
       
  0.977
ENSCING00000015055
Uncharacterized protein (148 aa)
     
  0.977
Cin.52569
Histone deacetylase (404 aa)
     
  0.957
ENSCING00000002360
Histone deacetylase (430 aa)
     
  0.957
trrap
Uncharacterized protein (2944 aa)
     
  0.957
ENSCING00000019090
Uncharacterized protein (303 aa)
     
  0.956
ENSCING00000014284
Uncharacterized protein (192 aa)
     
  0.934
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
Server load: low (13%) [HD]