STRINGSTRING
ENSCING00000000395 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000000395" - Uncharacterized protein in Ciona intestinalis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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Textmining
[Homology]
Score
ENSCING00000000395Uncharacterized protein ; Component of the transcription regulatory histone acetylation (HAT) complex SAGA, a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histone H2B. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription (256 aa)    
Predicted Functional Partners:
ENSCING00000006364
Uncharacterized protein (386 aa)
     
  0.983
zf(ubp)-3
Zinc finger protein 3 (993 aa)
     
  0.979
ENSCING00000015310
Uncharacterized protein (316 aa)
       
  0.979
ENSCING00000008712
Uncharacterized protein (423 aa)
     
  0.977
e(y)2
Enhancer of yellow 2 transcription factor homolog ; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates in a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 [...] (104 aa)
     
  0.968
Cin.24169
Uncharacterized protein (187 aa)
       
  0.960
ENSCING00000004104
Uncharacterized protein (587 aa)
       
  0.960
kat2b
Uncharacterized protein (365 aa)
     
  0.958
kat2a
Uncharacterized protein (709 aa)
     
  0.958
ENSCING00000001931
Uncharacterized protein (409 aa)
     
  0.957
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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