STRINGSTRING
ENSCING00000000404 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000000404" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000000404Uncharacterized protein (220 aa)    
Predicted Functional Partners:
ENSCING00000016753
Uncharacterized protein (175 aa)
 
          0.948
ENSCING00000005238
Branched-chain-amino-acid aminotransferase (410 aa)
   
  0.747
ENSCING00000022604
Uncharacterized protein (316 aa)
 
  0.716
acl
ATP citrate-lyase (404 aa)
   
 
  0.685
ENSCING00000007699
Uncharacterized protein (983 aa)
   
   
  0.677
ENSCING00000007286
Uncharacterized protein (370 aa)
   
  0.665
ENSCING00000007491
Uncharacterized protein (398 aa)
   
  0.663
ENSCING00000004407
Uncharacterized protein (353 aa)
   
  0.663
ENSCING00000012466
Uncharacterized protein (332 aa)
   
  0.660
ENSCING00000009373
Uncharacterized protein (444 aa)
   
  0.660
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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