STRINGSTRING
ENSCING00000000423 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000000423" - Methionine aminopeptidase in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000000423Methionine aminopeptidase (277 aa)    
Predicted Functional Partners:
ENSCING00000012827
Uncharacterized protein (287 aa)
   
   
  0.831
ENSCING00000023790
Uncharacterized protein (1081 aa)
   
   
  0.821
ENSCING00000005470
Methionine aminopeptidase ; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (474 aa)
     
 
  0.738
gmps
Uncharacterized protein (688 aa)
   
   
  0.708
ENSCING00000007544
Uncharacterized protein (1596 aa)
   
   
  0.691
ENSCING00000008395
Uncharacterized protein (392 aa)
   
 
  0.684
rpl3
Uncharacterized protein (411 aa)
   
 
  0.658
ENSCING00000012701
Uncharacterized protein (74 aa)
   
 
  0.646
ENSCING00000008014
Uncharacterized protein (281 aa)
   
 
  0.646
ENSCING00000003144
Uncharacterized protein (313 aa)
   
 
  0.646
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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