STRINGSTRING
Cin.34217 protein (Ciona intestinalis) - STRING interaction network
"Cin.34217" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.34217Uncharacterized protein (227 aa)    
Predicted Functional Partners:
ENSCING00000007891
Uncharacterized protein (1841 aa)
         
    0.800
ENSCING00000007177
Uncharacterized protein (1597 aa)
         
    0.800
lamb1
Uncharacterized protein (1602 aa)
         
    0.800
lama5
Uncharacterized protein (3767 aa)
         
    0.800
ENSCING00000010004
Uncharacterized protein (527 aa)
   
          0.524
ENSCING00000007635
Uncharacterized protein (556 aa)
   
          0.524
ENSCING00000015048
Uncharacterized protein (469 aa)
   
          0.524
ENSCING00000022676
Uncharacterized protein (401 aa)
   
          0.523
ENSCING00000003865
Uncharacterized protein (530 aa)
   
          0.523
ENSCING00000022437
Uncharacterized protein (411 aa)
   
          0.522
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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