STRINGSTRING
ic5 protein (Ciona intestinalis) - STRING interaction network
"ic5" - DC2-related axonemal dynein intermediate chain 5 in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ic5DC2-related axonemal dynein intermediate chain 5 (548 aa)    
Predicted Functional Partners:
ic1
Axonemal outer arm dynein intermediate chain 1 (594 aa)
     
 
  0.782
ic4
DC2-related axonemal dynein intermediate chain 4 (550 aa)
     
 
  0.747
ic2
Uncharacterized protein (661 aa)
     
 
  0.747
ENSCING00000022961
Uncharacterized protein (257 aa)
     
 
  0.667
dnal1
Dynein light chain 1, axonemal (190 aa)
     
 
  0.657
pf-rib
Protofilament ribbon protein (379 aa)
     
   
  0.646
wdr78
Uncharacterized protein (778 aa)
     
 
  0.645
ciic3
Thioredoxin domain-containing protein 3 homolog ; May be required during the final stages of sperm tail maturation. May act by reducing disulfide bonds within the sperm components (By similarity) (653 aa)
     
 
  0.634
ENSCING00000013152
Uncharacterized protein (478 aa)
     
 
  0.620
lrr37
Axonemal leucine-rich repeat protein (203 aa)
     
 
  0.618
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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