STRINGSTRING
Cin.23985 protein (Ciona intestinalis) - STRING interaction network
"Cin.23985" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.23985Uncharacterized protein (200 aa)    
Predicted Functional Partners:
ENSCING00000002655
Uncharacterized protein (445 aa)
       
  0.922
ENSCING00000005670
Uncharacterized protein (231 aa)
       
  0.867
ENSCING00000016031
Uncharacterized protein (152 aa)
       
  0.867
ENSCING00000004355
Uncharacterized protein (1236 aa)
       
  0.851
ENSCING00000003686
Uncharacterized protein (599 aa)
       
  0.845
ENSCING00000006400
Uncharacterized protein (479 aa)
       
  0.838
ENSCING00000012576
Uncharacterized protein (666 aa)
       
  0.805
ENSCING00000007520
Uncharacterized protein (909 aa)
       
  0.773
ENSCING00000018289
Uncharacterized protein (1694 aa)
       
  0.740
ENSCING00000023365
Uncharacterized protein (196 aa)
       
  0.698
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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