STRINGSTRING
cul4a protein (Ciona intestinalis) - STRING interaction network
"cul4a" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cul4aUncharacterized protein (614 aa)    
Predicted Functional Partners:
ddb1
Uncharacterized protein (1145 aa)
     
  0.989
ENSCING00000022721
Uncharacterized protein (104 aa)
     
  0.983
ENSCING00000006436
Uncharacterized protein (345 aa)
     
  0.979
ENSCING00000009475
Uncharacterized protein (475 aa)
     
  0.968
ENSCING00000001372
Uncharacterized protein (100 aa)
     
  0.965
Cin.27512
Uncharacterized protein (78 aa)
     
  0.965
cops4
COP9 signalosome subunit 4 (409 aa)
     
  0.963
ENSCING00000004284
Uncharacterized protein (369 aa)
     
  0.956
ENSCING00000001685
Uncharacterized protein (162 aa)
     
  0.947
ENSCING00000002846
Uncharacterized protein (235 aa)
     
  0.942
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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