STRINGSTRING
LOC778664 protein (Ciona intestinalis) - STRING interaction network
"LOC778664" - Transcription factor protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC778664Transcription factor protein (429 aa)    
Predicted Functional Partners:
ENSCING00000008035
Zinc finger protein Ci-ZF(ZZ/RING)-1 (778 aa)
     
 
  0.688
zf(zz)-7
Uncharacterized protein; Zinc finger protein (619 aa)
     
 
  0.688
ENSCING00000008022
Uncharacterized protein (1310 aa)
       
    0.422
ENSCING00000014428
Uncharacterized protein (519 aa)
       
    0.415
jun
Transcription factor protein (381 aa)
     
  0.414
nf-e2
Transcription factor protein isoform 2 (922 aa)
       
  0.407
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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