STRINGSTRING
Cin.20706 protein (Ciona intestinalis) - STRING interaction network
"Cin.20706" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cin.20706Uncharacterized protein (108 aa)    
Predicted Functional Partners:
ENSCING00000019152
Uncharacterized protein (82 aa)
     
 
  0.935
Cin.24608
Uncharacterized protein (95 aa)
     
      0.932
ENSCING00000007519
Uncharacterized protein (127 aa)
     
 
  0.866
ENSCING00000002730
Uncharacterized protein (502 aa)
     
 
  0.855
ENSCING00000022134
Uncharacterized protein (99 aa)
     
 
  0.745
ENSCING00000005665
Uncharacterized protein (626 aa)
     
      0.741
sf3b3
Uncharacterized protein (1216 aa)
       
 
  0.740
ENSCING00000024100
Uncharacterized protein (125 aa)
     
 
  0.737
ENSCING00000016042
Uncharacterized protein (167 aa)
     
      0.736
ENSCING00000020031
Uncharacterized protein (118 aa)
     
      0.734
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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