STRINGSTRING
ENSCING00000001176 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000001176" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000001176Uncharacterized protein (740 aa)    
Predicted Functional Partners:
LOC494405
Uncharacterized protein LOC494405 (406 aa)
     
  0.983
ENSCING00000013271
Uncharacterized protein (247 aa)
     
  0.976
ENSCING00000001546
Uncharacterized protein (1185 aa)
   
  0.972
ENSCING00000003830
Uncharacterized protein ; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3’,5’- phosphodiester. May act as a RNA ligase with broad substrate specificity, and may function toward other RNAs (504 aa)
     
  0.811
ENSCING00000009221
Uncharacterized protein (572 aa)
     
  0.799
ENSCING00000002708
Uncharacterized protein (147 aa)
     
  0.794
dpyd
Uncharacterized protein (1024 aa)
   
   
  0.790
ENSCING00000004877
Uncharacterized protein ; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs (164 aa)
     
  0.774
ENSCING00000022087
Uncharacterized protein (394 aa)
       
  0.761
ENSCING00000018708
Uncharacterized protein (1528 aa)
   
  0.761
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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