STRINGSTRING
sf3b3 protein (Ciona intestinalis) - STRING interaction network
"sf3b3" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sf3b3Uncharacterized protein (1216 aa)    
Predicted Functional Partners:
ENSCING00000021953
Uncharacterized protein (86 aa)
     
  0.998
ENSCING00000002337
Uncharacterized protein (375 aa)
     
  0.997
ENSCING00000005665
Uncharacterized protein (626 aa)
     
  0.997
ENSCING00000012689
Uncharacterized protein (127 aa)
       
  0.995
ENSCING00000008817
Uncharacterized protein (956 aa)
     
  0.992
sf3b1
Uncharacterized protein (898 aa)
     
  0.991
ENSCING00000023523
Uncharacterized protein (482 aa)
     
  0.991
ENSCING00000022206
Uncharacterized protein (486 aa)
     
  0.991
prpf19
Uncharacterized protein (437 aa)
     
  0.991
ENSCING00000007995
Uncharacterized protein (779 aa)
     
  0.989
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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